Resource

Id	summary/zemke2024Epigenetic/pseudobulk_rna/CA1/age20-40/bigwigcontent_copy
Type	position_score
Version	0
Summary	RNA for CA1 cell type for age_range age20-40
Description
Labels	age_range: age20-40 assay: 10x_Multiome brain_region: hippocampus cell_type: CA1 data_types: expression_signal dataset: zemke2024Epigenetic modalities: RNA processing_level: RPKM_normalized reference_genome: reference/Human/genome/ucsc-hg38 resolution: pseudo_bulk_cell_type sequencing_platform: Illumina species: human vendor: 10x_Genomics

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2024Epigenetic_RNA_CA1_age20-40	float	zemke2024Epigenetic_RNA_CA1_age20-40	RPKM?		[0, 6.18e+04]	n 3,099,750,718 mean 0.955 sd 30.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome	Covered positions	Covered %	Segments
all chromosomes	3099750718		13984538
chr1	248956422	100.00%	1237847
chr2	242193529	100.00%	1192235
chr3	198295559	100.00%	1040205
chr4	190214555	100.00%	752003
chr5	181538259	100.00%	820313
chr6	170805979	100.00%	796426
chr7	159345973	100.00%	844515
chr8	145138636	100.00%	651614
chr9	138394717	100.00%	596813
chr10	133797422	100.00%	670150
chr11	135086622	100.00%	644532
chr12	133275309	100.00%	678228
chr13	114364328	100.00%	416750
chr14	107043718	100.00%	423750
chr15	101991189	100.00%	465500
chr16	90338345	100.00%	423837
chr17	83257441	100.00%	479185
chr18	80373285	100.00%	315898
chr19	58617616	100.00%	341478
chr20	64444167	100.00%	280322
chr21	46709983	100.00%	162908
chr22	50818468	100.00%	201100
chrM	16569	100.00%	332
chrX	156040895	100.00%	517386
chrY	57227415	100.00%	12275
GL000008.2	209709		303
GL000009.2	201709		485
GL000194.1	191469		818
GL000195.1	182896		615
GL000205.2	185591		387
GL000208.1	92689		60
GL000213.1	164239		60
GL000214.1	137718		322
GL000216.2	176608		40
GL000218.1	161147		598
GL000219.1	179198		1429
GL000220.1	161802		872
GL000221.1	155397		676
GL000224.1	179693		345
GL000225.1	211173		44
GL000226.1	15008		1
KI270302.1	2274		1
KI270303.1	1942		11
KI270304.1	2165		3
KI270305.1	1472		1
KI270310.1	1201		12
KI270311.1	12399		14
KI270312.1	998		1
KI270315.1	2276		9
KI270316.1	1444		1
KI270317.1	37690		5
KI270320.1	4416		12
KI270322.1	21476		3
KI270329.1	1040		1
KI270330.1	1652		20
KI270333.1	2699		1
KI270334.1	1368		1
KI270335.1	1048		1
KI270336.1	1026		1
KI270337.1	1121		1
KI270338.1	1428		1
KI270340.1	1428		1
KI270362.1	3530		1
KI270363.1	1803		1
KI270364.1	2855		1
KI270366.1	8320		1
KI270371.1	2805		1
KI270372.1	1650		1
KI270373.1	1451		1
KI270374.1	2656		1
KI270375.1	2378		1
KI270376.1	1136		1
KI270378.1	1048		1
KI270379.1	1045		8
KI270381.1	1930		1
KI270382.1	4215		1
KI270383.1	1750		1
KI270384.1	1658		1
KI270385.1	990		1
KI270386.1	1788		1
KI270387.1	1537		1
KI270388.1	1216		1
KI270389.1	1298		1
KI270390.1	2387		1
KI270391.1	1484		1
KI270392.1	971		1
KI270393.1	1308		1
KI270394.1	970		1
KI270395.1	1143		1
KI270396.1	1880		1
KI270411.1	2646		1
KI270412.1	1179		1
KI270414.1	2489		1
KI270417.1	2043		1
KI270418.1	2145		1
KI270419.1	1029		1
KI270420.1	2321		1
KI270422.1	1445		1
KI270423.1	981		1
KI270424.1	2140		1
KI270425.1	1884		1
KI270429.1	1361		1
KI270435.1	92983		33
KI270438.1	112505		5
KI270442.1	392061		264
KI270448.1	7992		10
KI270465.1	1774		1
KI270466.1	1233		1
KI270467.1	3920		1
KI270468.1	4055		5
KI270507.1	5353		1
KI270508.1	1951		1
KI270509.1	2318		1
KI270510.1	2415		1
KI270511.1	8127		1
KI270512.1	22689		13
KI270515.1	6361		1
KI270516.1	1300		1
KI270517.1	3253		1
KI270518.1	2186		1
KI270519.1	138126		32
KI270521.1	7642		5
KI270522.1	5674		1
KI270528.1	2983		1
KI270529.1	1899		1
KI270530.1	2168		3
KI270538.1	91309		6
KI270539.1	993		1
KI270544.1	1202		1
KI270548.1	1599		1
KI270579.1	31033		1
KI270580.1	1553		5
KI270581.1	7046		1
KI270582.1	6504		1
KI270583.1	1400		3
KI270584.1	4513		1
KI270587.1	2969		1
KI270588.1	6158		1
KI270589.1	44474		16
KI270590.1	4685		1
KI270591.1	5796		1
KI270593.1	3041		1
KI270706.1	175055		1123
KI270707.1	32032		172
KI270708.1	127682		55
KI270709.1	66860		25
KI270710.1	40176		13
KI270711.1	42210		304
KI270712.1	176043		1141
KI270713.1	40745		270
KI270714.1	41717		91
KI270715.1	161471		39
KI270716.1	153799		39
KI270717.1	40062		288
KI270718.1	38054		663
KI270719.1	176845		934
KI270720.1	39050		90
KI270721.1	100316		102
KI270722.1	194050		49
KI270723.1	38115		18
KI270724.1	39555		15
KI270725.1	172810		174
KI270726.1	43739		15
KI270727.1	448248		568
KI270728.1	1872759		800
KI270729.1	280839		62
KI270730.1	112551		7
KI270731.1	150754		79
KI270732.1	41543		27
KI270733.1	179772		862
KI270734.1	165050		206
KI270735.1	42811		29
KI270736.1	181920		11
KI270737.1	103838		33
KI270738.1	99375		44
KI270739.1	73985		13
KI270740.1	37240		1
KI270741.1	157432		304
KI270742.1	186739		921
KI270743.1	210658		282
KI270744.1	168472		510
KI270745.1	41891		150
KI270746.1	66486		66
KI270747.1	198735		65
KI270748.1	93321		97
KI270749.1	158759		122
KI270750.1	148850		71
KI270751.1	150742		211
KI270752.1	27745		1
KI270753.1	62944		26
KI270754.1	40191		5
KI270755.1	36723		99
KI270756.1	79590		1
KI270757.1	71251		13

Segment lengths

	segments	min	max	mean	median
segments	13984538	2	30184000	221.66	50

Files

Filename	Size	md5
GSE278576_RNA_CA1_age20-40.bw	77.62 MB	7ab9f85fd41b075f9b4ae8782a08e9bc
genomic_resource.yaml	1.1 KB	c4c8f25df6260229db1d9da4f05f874a
statistics/