Resource

Id summary/zemke2024Epigenetic/pseudobulk_rna/NR2F2/age20-40/bigwigcontent_copy
Type position_score
Version 0
Summary RNA for NR2F2 cell type for age_range age20-40
Description
Labels
  • age_range: age20-40
  • assay: 10x_Multiome
  • brain_region: hippocampus
  • cell_type: NR2F2
  • data_types: expression_signal
  • dataset: zemke2024Epigenetic
  • modalities: RNA
  • processing_level: RPKM_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (1)

ID Type Default annotation Description Histogram Range Summary
zemke2024Epigenetic_RNA_NR2F2_age20-40 float

zemke2024Epigenetic_RNA_NR2F2_age20-40

RPKM?
HISTOGRAM FOR zemke2024Epigenetic_RNA_NR2F2_age20-40 [0, 5.39e+04]
n
3,099,750,718
mean
0.944
sd
32.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3099750718 6754927
chr1 248956422 100.00% 567535
chr2 242193529 100.00% 576572
chr3 198295559 100.00% 548545
chr4 190214555 100.00% 404352
chr5 181538259 100.00% 395917
chr6 170805979 100.00% 387289
chr7 159345973 100.00% 421318
chr8 145138636 100.00% 320179
chr9 138394717 100.00% 292712
chr10 133797422 100.00% 312217
chr11 135086622 100.00% 312402
chr12 133275309 100.00% 337991
chr13 114364328 100.00% 198098
chr14 107043718 100.00% 232467
chr15 101991189 100.00% 219068
chr16 90338345 100.00% 187750
chr17 83257441 100.00% 219118
chr18 80373285 100.00% 139379
chr19 58617616 100.00% 151387
chr20 64444167 100.00% 124243
chr21 46709983 100.00% 80297
chr22 50818468 100.00% 86114
chrM 16569 100.00% 331
chrX 156040895 100.00% 217324
chrY 57227415 100.00% 14266
GL000008.2 209709 91
GL000009.2 201709 140
GL000194.1 191469 427
GL000195.1 182896 210
GL000205.2 185591 91
GL000208.1 92689 11
GL000213.1 164239 62
GL000214.1 137718 62
GL000216.2 176608 10
GL000218.1 161147 226
GL000219.1 179198 703
GL000220.1 161802 493
GL000221.1 155397 337
GL000224.1 179693 136
GL000225.1 211173 10
GL000226.1 15008 1
KI270302.1 2274 1
KI270303.1 1942 1
KI270304.1 2165 3
KI270305.1 1472 1
KI270310.1 1201 3
KI270311.1 12399 1
KI270312.1 998 1
KI270315.1 2276 1
KI270316.1 1444 1
KI270317.1 37690 1
KI270320.1 4416 1
KI270322.1 21476 1
KI270329.1 1040 1
KI270330.1 1652 13
KI270333.1 2699 1
KI270334.1 1368 1
KI270335.1 1048 1
KI270336.1 1026 1
KI270337.1 1121 1
KI270338.1 1428 1
KI270340.1 1428 1
KI270362.1 3530 1
KI270363.1 1803 2
KI270364.1 2855 1
KI270366.1 8320 1
KI270371.1 2805 1
KI270372.1 1650 1
KI270373.1 1451 1
KI270374.1 2656 1
KI270375.1 2378 1
KI270376.1 1136 1
KI270378.1 1048 1
KI270379.1 1045 1
KI270381.1 1930 1
KI270382.1 4215 1
KI270383.1 1750 1
KI270384.1 1658 1
KI270385.1 990 1
KI270386.1 1788 1
KI270387.1 1537 1
KI270388.1 1216 1
KI270389.1 1298 1
KI270390.1 2387 1
KI270391.1 1484 1
KI270392.1 971 1
KI270393.1 1308 1
KI270394.1 970 1
KI270395.1 1143 1
KI270396.1 1880 1
KI270411.1 2646 1
KI270412.1 1179 1
KI270414.1 2489 1
KI270417.1 2043 1
KI270418.1 2145 1
KI270419.1 1029 1
KI270420.1 2321 1
KI270422.1 1445 1
KI270423.1 981 1
KI270424.1 2140 1
KI270425.1 1884 1
KI270429.1 1361 1
KI270435.1 92983 14
KI270438.1 112505 5
KI270442.1 392061 121
KI270448.1 7992 7
KI270465.1 1774 1
KI270466.1 1233 1
KI270467.1 3920 1
KI270468.1 4055 2
KI270507.1 5353 1
KI270508.1 1951 1
KI270509.1 2318 1
KI270510.1 2415 1
KI270511.1 8127 1
KI270512.1 22689 5
KI270515.1 6361 1
KI270516.1 1300 1
KI270517.1 3253 1
KI270518.1 2186 1
KI270519.1 138126 3
KI270521.1 7642 5
KI270522.1 5674 1
KI270528.1 2983 1
KI270529.1 1899 1
KI270530.1 2168 1
KI270538.1 91309 5
KI270539.1 993 1
KI270544.1 1202 1
KI270548.1 1599 1
KI270579.1 31033 1
KI270580.1 1553 1
KI270581.1 7046 1
KI270582.1 6504 3
KI270583.1 1400 1
KI270584.1 4513 1
KI270587.1 2969 1
KI270588.1 6158 1
KI270589.1 44474 3
KI270590.1 4685 1
KI270591.1 5796 1
KI270593.1 3041 1
KI270706.1 175055 314
KI270707.1 32032 64
KI270708.1 127682 13
KI270709.1 66860 15
KI270710.1 40176 5
KI270711.1 42210 140
KI270712.1 176043 287
KI270713.1 40745 76
KI270714.1 41717 61
KI270715.1 161471 13
KI270716.1 153799 15
KI270717.1 40062 89
KI270718.1 38054 480
KI270719.1 176845 578
KI270720.1 39050 37
KI270721.1 100316 25
KI270722.1 194050 20
KI270723.1 38115 11
KI270724.1 39555 3
KI270725.1 172810 98
KI270726.1 43739 1
KI270727.1 448248 375
KI270728.1 1872759 256
KI270729.1 280839 28
KI270730.1 112551 3
KI270731.1 150754 58
KI270732.1 41543 18
KI270733.1 179772 470
KI270734.1 165050 91
KI270735.1 42811 5
KI270736.1 181920 1
KI270737.1 103838 10
KI270738.1 99375 28
KI270739.1 73985 5
KI270740.1 37240 3
KI270741.1 157432 77
KI270742.1 186739 398
KI270743.1 210658 97
KI270744.1 168472 128
KI270745.1 41891 51
KI270746.1 66486 99
KI270747.1 198735 43
KI270748.1 93321 45
KI270749.1 158759 46
KI270750.1 148850 7
KI270751.1 150742 29
KI270752.1 27745 1
KI270753.1 62944 11
KI270754.1 40191 1
KI270755.1 36723 35
KI270756.1 79590 1
KI270757.1 71251 1

Segment lengths

segments min max mean median
segments 6754927 2 30222250 458.89 50
global segment-length histogram

Files

Filename Size md5
GSE278576_RNA_NR2F2_age20-40.bw 36.72 MB 6e05588443224035260021926b28feb2
genomic_resource.yaml 1.11 KB 07a3eac7ad598af6cc6dd4fd799ccb22
statistics/