Resource

Id summary/zemke2024Epigenetic/pseudobulk_rna/NR2F2/age40-60/bigwigcontent_copy
Type position_score
Version 0
Summary RNA for NR2F2 cell type for age_range age40-60
Description
Labels
  • age_range: age40-60
  • assay: 10x_Multiome
  • brain_region: hippocampus
  • cell_type: NR2F2
  • data_types: expression_signal
  • dataset: zemke2024Epigenetic
  • modalities: RNA
  • processing_level: RPKM_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (1)

ID Type Default annotation Description Histogram Range Summary
zemke2024Epigenetic_RNA_NR2F2_age40-60 float

zemke2024Epigenetic_RNA_NR2F2_age40-60

RPKM?
HISTOGRAM FOR zemke2024Epigenetic_RNA_NR2F2_age40-60 [0, 4.77e+04]
n
3,099,750,718
mean
0.96
sd
25.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3099750718 10929047
chr1 248956422 100.00% 919753
chr2 242193529 100.00% 928512
chr3 198295559 100.00% 850003
chr4 190214555 100.00% 639442
chr5 181538259 100.00% 647359
chr6 170805979 100.00% 627619
chr7 159345973 100.00% 672796
chr8 145138636 100.00% 521171
chr9 138394717 100.00% 477923
chr10 133797422 100.00% 509535
chr11 135086622 100.00% 507017
chr12 133275309 100.00% 536070
chr13 114364328 100.00% 313271
chr14 107043718 100.00% 366437
chr15 101991189 100.00% 360840
chr16 90338345 100.00% 315000
chr17 83257441 100.00% 351107
chr18 80373285 100.00% 237115
chr19 58617616 100.00% 248730
chr20 64444167 100.00% 209786
chr21 46709983 100.00% 126775
chr22 50818468 100.00% 140860
chrM 16569 100.00% 330
chrX 156040895 100.00% 378474
chrY 57227415 100.00% 28596
GL000008.2 209709 309
GL000009.2 201709 411
GL000194.1 191469 634
GL000195.1 182896 522
GL000205.2 185591 289
GL000208.1 92689 32
GL000213.1 164239 61
GL000214.1 137718 159
GL000216.2 176608 36
GL000218.1 161147 650
GL000219.1 179198 1108
GL000220.1 161802 571
GL000221.1 155397 618
GL000224.1 179693 332
GL000225.1 211173 60
GL000226.1 15008 1
KI270302.1 2274 7
KI270303.1 1942 3
KI270304.1 2165 3
KI270305.1 1472 5
KI270310.1 1201 5
KI270311.1 12399 1
KI270312.1 998 1
KI270315.1 2276 1
KI270316.1 1444 1
KI270317.1 37690 5
KI270320.1 4416 7
KI270322.1 21476 1
KI270329.1 1040 1
KI270330.1 1652 12
KI270333.1 2699 1
KI270334.1 1368 1
KI270335.1 1048 1
KI270336.1 1026 1
KI270337.1 1121 1
KI270338.1 1428 1
KI270340.1 1428 1
KI270362.1 3530 1
KI270363.1 1803 5
KI270364.1 2855 1
KI270366.1 8320 1
KI270371.1 2805 1
KI270372.1 1650 1
KI270373.1 1451 1
KI270374.1 2656 1
KI270375.1 2378 1
KI270376.1 1136 1
KI270378.1 1048 1
KI270379.1 1045 1
KI270381.1 1930 1
KI270382.1 4215 1
KI270383.1 1750 1
KI270384.1 1658 1
KI270385.1 990 1
KI270386.1 1788 1
KI270387.1 1537 1
KI270388.1 1216 1
KI270389.1 1298 1
KI270390.1 2387 1
KI270391.1 1484 1
KI270392.1 971 1
KI270393.1 1308 1
KI270394.1 970 1
KI270395.1 1143 1
KI270396.1 1880 1
KI270411.1 2646 3
KI270412.1 1179 1
KI270414.1 2489 1
KI270417.1 2043 1
KI270418.1 2145 1
KI270419.1 1029 1
KI270420.1 2321 1
KI270422.1 1445 1
KI270423.1 981 1
KI270424.1 2140 1
KI270425.1 1884 1
KI270429.1 1361 1
KI270435.1 92983 29
KI270438.1 112505 5
KI270442.1 392061 174
KI270448.1 7992 4
KI270465.1 1774 1
KI270466.1 1233 1
KI270467.1 3920 3
KI270468.1 4055 3
KI270507.1 5353 1
KI270508.1 1951 1
KI270509.1 2318 1
KI270510.1 2415 1
KI270511.1 8127 1
KI270512.1 22689 5
KI270515.1 6361 1
KI270516.1 1300 1
KI270517.1 3253 1
KI270518.1 2186 1
KI270519.1 138126 11
KI270521.1 7642 1
KI270522.1 5674 1
KI270528.1 2983 1
KI270529.1 1899 1
KI270530.1 2168 1
KI270538.1 91309 7
KI270539.1 993 1
KI270544.1 1202 1
KI270548.1 1599 1
KI270579.1 31033 1
KI270580.1 1553 1
KI270581.1 7046 1
KI270582.1 6504 1
KI270583.1 1400 1
KI270584.1 4513 1
KI270587.1 2969 1
KI270588.1 6158 1
KI270589.1 44474 15
KI270590.1 4685 1
KI270591.1 5796 1
KI270593.1 3041 1
KI270706.1 175055 846
KI270707.1 32032 121
KI270708.1 127682 37
KI270709.1 66860 37
KI270710.1 40176 7
KI270711.1 42210 283
KI270712.1 176043 458
KI270713.1 40745 118
KI270714.1 41717 51
KI270715.1 161471 19
KI270716.1 153799 13
KI270717.1 40062 150
KI270718.1 38054 528
KI270719.1 176845 688
KI270720.1 39050 51
KI270721.1 100316 57
KI270722.1 194050 56
KI270723.1 38115 15
KI270724.1 39555 10
KI270725.1 172810 126
KI270726.1 43739 9
KI270727.1 448248 838
KI270728.1 1872759 470
KI270729.1 280839 53
KI270730.1 112551 5
KI270731.1 150754 144
KI270732.1 41543 28
KI270733.1 179772 568
KI270734.1 165050 262
KI270735.1 42811 7
KI270736.1 181920 9
KI270737.1 103838 19
KI270738.1 99375 38
KI270739.1 73985 7
KI270740.1 37240 7
KI270741.1 157432 205
KI270742.1 186739 837
KI270743.1 210658 241
KI270744.1 168472 235
KI270745.1 41891 106
KI270746.1 66486 93
KI270747.1 198735 57
KI270748.1 93321 120
KI270749.1 158759 101
KI270750.1 148850 31
KI270751.1 150742 85
KI270752.1 27745 3
KI270753.1 62944 17
KI270754.1 40191 1
KI270755.1 36723 70
KI270756.1 79590 1
KI270757.1 71251 3

Segment lengths

segments min max mean median
segments 10929047 2 30209950 283.62 50
global segment-length histogram

Files

Filename Size md5
GSE278576_RNA_NR2F2_age40-60.bw 60.16 MB 86391d5bb351dde4d437d2dafa9c2ec0
genomic_resource.yaml 1.11 KB fb9873565f5f5331b8fa7896c91d5f56
statistics/