Resource

Id summary/zemke2024Epigenetic/pseudobulk_rna/NR2F2/age60-80/bigwigcontent_copy
Type position_score
Version 0
Summary RNA for NR2F2 cell type for age_range age60-80
Description
Labels
  • age_range: age60-80
  • assay: 10x_Multiome
  • brain_region: hippocampus
  • cell_type: NR2F2
  • data_types: expression_signal
  • dataset: zemke2024Epigenetic
  • modalities: RNA
  • processing_level: RPKM_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (1)

ID Type Default annotation Description Histogram Range Summary
zemke2024Epigenetic_RNA_NR2F2_age60-80 float

zemke2024Epigenetic_RNA_NR2F2_age60-80

RPKM?
HISTOGRAM FOR zemke2024Epigenetic_RNA_NR2F2_age60-80 [0, 5.62e+04]
n
3,099,750,718
mean
0.944
sd
26.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3099750718 8983469
chr1 248956422 100.00% 750830
chr2 242193529 100.00% 771238
chr3 198295559 100.00% 731185
chr4 190214555 100.00% 529507
chr5 181538259 100.00% 546384
chr6 170805979 100.00% 509362
chr7 159345973 100.00% 563031
chr8 145138636 100.00% 418311
chr9 138394717 100.00% 381045
chr10 133797422 100.00% 413332
chr11 135086622 100.00% 411289
chr12 133275309 100.00% 450083
chr13 114364328 100.00% 255636
chr14 107043718 100.00% 295593
chr15 101991189 100.00% 291333
chr16 90338345 100.00% 257665
chr17 83257441 100.00% 289223
chr18 80373285 100.00% 197626
chr19 58617616 100.00% 196192
chr20 64444167 100.00% 168525
chr21 46709983 100.00% 104840
chr22 50818468 100.00% 115562
chrM 16569 100.00% 331
chrX 156040895 100.00% 305922
chrY 57227415 100.00% 17818
GL000008.2 209709 162
GL000009.2 201709 291
GL000194.1 191469 506
GL000195.1 182896 361
GL000205.2 185591 188
GL000208.1 92689 13
GL000213.1 164239 38
GL000214.1 137718 130
GL000216.2 176608 18
GL000218.1 161147 305
GL000219.1 179198 962
GL000220.1 161802 493
GL000221.1 155397 502
GL000224.1 179693 246
GL000225.1 211173 13
GL000226.1 15008 1
KI270302.1 2274 1
KI270303.1 1942 1
KI270304.1 2165 3
KI270305.1 1472 1
KI270310.1 1201 3
KI270311.1 12399 1
KI270312.1 998 1
KI270315.1 2276 3
KI270316.1 1444 1
KI270317.1 37690 5
KI270320.1 4416 1
KI270322.1 21476 1
KI270329.1 1040 1
KI270330.1 1652 17
KI270333.1 2699 1
KI270334.1 1368 1
KI270335.1 1048 1
KI270336.1 1026 1
KI270337.1 1121 1
KI270338.1 1428 1
KI270340.1 1428 1
KI270362.1 3530 1
KI270363.1 1803 1
KI270364.1 2855 1
KI270366.1 8320 1
KI270371.1 2805 1
KI270372.1 1650 1
KI270373.1 1451 1
KI270374.1 2656 1
KI270375.1 2378 1
KI270376.1 1136 1
KI270378.1 1048 1
KI270379.1 1045 3
KI270381.1 1930 1
KI270382.1 4215 1
KI270383.1 1750 1
KI270384.1 1658 1
KI270385.1 990 1
KI270386.1 1788 1
KI270387.1 1537 1
KI270388.1 1216 1
KI270389.1 1298 1
KI270390.1 2387 1
KI270391.1 1484 1
KI270392.1 971 1
KI270393.1 1308 1
KI270394.1 970 1
KI270395.1 1143 1
KI270396.1 1880 1
KI270411.1 2646 1
KI270412.1 1179 1
KI270414.1 2489 1
KI270417.1 2043 1
KI270418.1 2145 1
KI270419.1 1029 1
KI270420.1 2321 1
KI270422.1 1445 1
KI270423.1 981 1
KI270424.1 2140 1
KI270425.1 1884 1
KI270429.1 1361 1
KI270435.1 92983 5
KI270438.1 112505 5
KI270442.1 392061 138
KI270448.1 7992 5
KI270465.1 1774 1
KI270466.1 1233 3
KI270467.1 3920 5
KI270468.1 4055 1
KI270507.1 5353 1
KI270508.1 1951 3
KI270509.1 2318 1
KI270510.1 2415 1
KI270511.1 8127 1
KI270512.1 22689 9
KI270515.1 6361 1
KI270516.1 1300 1
KI270517.1 3253 1
KI270518.1 2186 1
KI270519.1 138126 11
KI270521.1 7642 1
KI270522.1 5674 1
KI270528.1 2983 1
KI270529.1 1899 1
KI270530.1 2168 1
KI270538.1 91309 5
KI270539.1 993 1
KI270544.1 1202 1
KI270548.1 1599 1
KI270579.1 31033 1
KI270580.1 1553 1
KI270581.1 7046 1
KI270582.1 6504 1
KI270583.1 1400 1
KI270584.1 4513 1
KI270587.1 2969 1
KI270588.1 6158 1
KI270589.1 44474 9
KI270590.1 4685 1
KI270591.1 5796 1
KI270593.1 3041 1
KI270706.1 175055 644
KI270707.1 32032 76
KI270708.1 127682 19
KI270709.1 66860 32
KI270710.1 40176 1
KI270711.1 42210 261
KI270712.1 176043 445
KI270713.1 40745 105
KI270714.1 41717 69
KI270715.1 161471 15
KI270716.1 153799 21
KI270717.1 40062 120
KI270718.1 38054 523
KI270719.1 176845 672
KI270720.1 39050 44
KI270721.1 100316 50
KI270722.1 194050 33
KI270723.1 38115 13
KI270724.1 39555 19
KI270725.1 172810 102
KI270726.1 43739 5
KI270727.1 448248 816
KI270728.1 1872759 360
KI270729.1 280839 56
KI270730.1 112551 5
KI270731.1 150754 40
KI270732.1 41543 24
KI270733.1 179772 494
KI270734.1 165050 150
KI270735.1 42811 13
KI270736.1 181920 17
KI270737.1 103838 18
KI270738.1 99375 29
KI270739.1 73985 5
KI270740.1 37240 13
KI270741.1 157432 182
KI270742.1 186739 600
KI270743.1 210658 136
KI270744.1 168472 215
KI270745.1 41891 109
KI270746.1 66486 167
KI270747.1 198735 36
KI270748.1 93321 43
KI270749.1 158759 52
KI270750.1 148850 17
KI270751.1 150742 87
KI270752.1 27745 1
KI270753.1 62944 23
KI270754.1 40191 1
KI270755.1 36723 81
KI270756.1 79590 1
KI270757.1 71251 1

Segment lengths

segments min max mean median
segments 8983469 1 30073400 345.05 50
global segment-length histogram

Files

Filename Size md5
GSE278576_RNA_NR2F2_age60-80.bw 48.7 MB cbf4e1575aaab4e2de650aedfe2dcb88
genomic_resource.yaml 1.11 KB a20e449f4a8ed74f7d27139ca73b6920
statistics/