Resource

Id summary/zemke2024Epigenetic/pseudobulk_rna/NR2F2/all/bigwigcontent_copy
Type position_score
Version 0
Summary RNA for NR2F2 cell type for age_range all
Description
Labels
  • age_range: all
  • assay: 10x_Multiome
  • brain_region: hippocampus
  • cell_type: NR2F2
  • data_types: expression_signal
  • dataset: zemke2024Epigenetic
  • modalities: RNA
  • processing_level: RPKM_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (1)

ID Type Default annotation Description Histogram Range Summary
zemke2024Epigenetic_RNA_NR2F2_all float

zemke2024Epigenetic_RNA_NR2F2_all

RPKM?
HISTOGRAM FOR zemke2024Epigenetic_RNA_NR2F2_all [0, 4.88e+04]
n
3,099,750,718
mean
0.946
sd
24.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3099750718 19196721
chr1 248956422 100.00% 1594315
chr2 242193529 100.00% 1613254
chr3 198295559 100.00% 1446191
chr4 190214555 100.00% 1101534
chr5 181538259 100.00% 1168928
chr6 170805979 100.00% 1114823
chr7 159345973 100.00% 1182050
chr8 145138636 100.00% 897624
chr9 138394717 100.00% 837699
chr10 133797422 100.00% 885505
chr11 135086622 100.00% 886615
chr12 133275309 100.00% 935342
chr13 114364328 100.00% 533602
chr14 107043718 100.00% 618463
chr15 101991189 100.00% 637999
chr16 90338345 100.00% 556852
chr17 83257441 100.00% 618802
chr18 80373285 100.00% 441404
chr19 58617616 100.00% 439623
chr20 64444167 100.00% 387001
chr21 46709983 100.00% 220041
chr22 50818468 100.00% 254984
chrM 16569 100.00% 331
chrX 156040895 100.00% 743012
chrY 57227415 100.00% 53387
GL000008.2 209709 622
GL000009.2 201709 855
GL000194.1 191469 1023
GL000195.1 182896 826
GL000205.2 185591 504
GL000208.1 92689 70
GL000213.1 164239 149
GL000214.1 137718 389
GL000216.2 176608 88
GL000218.1 161147 922
GL000219.1 179198 1837
GL000220.1 161802 736
GL000221.1 155397 994
GL000224.1 179693 709
GL000225.1 211173 113
GL000226.1 15008 1
KI270302.1 2274 7
KI270303.1 1942 3
KI270304.1 2165 7
KI270305.1 1472 5
KI270310.1 1201 9
KI270311.1 12399 1
KI270312.1 998 1
KI270315.1 2276 5
KI270316.1 1444 1
KI270317.1 37690 9
KI270320.1 4416 7
KI270322.1 21476 7
KI270329.1 1040 1
KI270330.1 1652 19
KI270333.1 2699 1
KI270334.1 1368 1
KI270335.1 1048 1
KI270336.1 1026 1
KI270337.1 1121 1
KI270338.1 1428 1
KI270340.1 1428 1
KI270362.1 3530 1
KI270363.1 1803 7
KI270364.1 2855 1
KI270366.1 8320 1
KI270371.1 2805 1
KI270372.1 1650 1
KI270373.1 1451 1
KI270374.1 2656 1
KI270375.1 2378 1
KI270376.1 1136 1
KI270378.1 1048 1
KI270379.1 1045 3
KI270381.1 1930 1
KI270382.1 4215 1
KI270383.1 1750 1
KI270384.1 1658 1
KI270385.1 990 1
KI270386.1 1788 1
KI270387.1 1537 1
KI270388.1 1216 1
KI270389.1 1298 1
KI270390.1 2387 1
KI270391.1 1484 1
KI270392.1 971 1
KI270393.1 1308 1
KI270394.1 970 1
KI270395.1 1143 1
KI270396.1 1880 1
KI270411.1 2646 3
KI270412.1 1179 1
KI270414.1 2489 1
KI270417.1 2043 1
KI270418.1 2145 1
KI270419.1 1029 1
KI270420.1 2321 1
KI270422.1 1445 1
KI270423.1 981 1
KI270424.1 2140 1
KI270425.1 1884 1
KI270429.1 1361 1
KI270435.1 92983 50
KI270438.1 112505 19
KI270442.1 392061 364
KI270448.1 7992 11
KI270465.1 1774 1
KI270466.1 1233 3
KI270467.1 3920 8
KI270468.1 4055 6
KI270507.1 5353 1
KI270508.1 1951 3
KI270509.1 2318 3
KI270510.1 2415 1
KI270511.1 8127 1
KI270512.1 22689 25
KI270515.1 6361 3
KI270516.1 1300 1
KI270517.1 3253 1
KI270518.1 2186 1
KI270519.1 138126 41
KI270521.1 7642 5
KI270522.1 5674 1
KI270528.1 2983 1
KI270529.1 1899 1
KI270530.1 2168 1
KI270538.1 91309 15
KI270539.1 993 1
KI270544.1 1202 1
KI270548.1 1599 1
KI270579.1 31033 1
KI270580.1 1553 1
KI270581.1 7046 1
KI270582.1 6504 5
KI270583.1 1400 1
KI270584.1 4513 1
KI270587.1 2969 1
KI270588.1 6158 3
KI270589.1 44474 20
KI270590.1 4685 1
KI270591.1 5796 1
KI270593.1 3041 1
KI270706.1 175055 1609
KI270707.1 32032 250
KI270708.1 127682 84
KI270709.1 66860 74
KI270710.1 40176 13
KI270711.1 42210 487
KI270712.1 176043 921
KI270713.1 40745 262
KI270714.1 41717 180
KI270715.1 161471 117
KI270716.1 153799 131
KI270717.1 40062 263
KI270718.1 38054 659
KI270719.1 176845 1147
KI270720.1 39050 136
KI270721.1 100316 113
KI270722.1 194050 143
KI270723.1 38115 32
KI270724.1 39555 34
KI270725.1 172810 289
KI270726.1 43739 13
KI270727.1 448248 1855
KI270728.1 1872759 1178
KI270729.1 280839 146
KI270730.1 112551 15
KI270731.1 150754 255
KI270732.1 41543 70
KI270733.1 179772 734
KI270734.1 165050 502
KI270735.1 42811 30
KI270736.1 181920 40
KI270737.1 103838 50
KI270738.1 99375 118
KI270739.1 73985 17
KI270740.1 37240 38
KI270741.1 157432 477
KI270742.1 186739 1405
KI270743.1 210658 531
KI270744.1 168472 567
KI270745.1 41891 215
KI270746.1 66486 381
KI270747.1 198735 150
KI270748.1 93321 221
KI270749.1 158759 201
KI270750.1 148850 85
KI270751.1 150742 293
KI270752.1 27745 3
KI270753.1 62944 55
KI270754.1 40191 1
KI270755.1 36723 158
KI270756.1 79590 3
KI270757.1 71251 5

Segment lengths

segments min max mean median
segments 19196721 1 30055650 161.47 50
global segment-length histogram

Files

Filename Size md5
GSE278576_RNA_NR2F2.bw 107.95 MB edc3e5a450726720c1f1ae9a093af87b
genomic_resource.yaml 1.08 KB ab4b7a7730f9d7acb81d844d1acb715d
statistics/