Resource

Id summary/zemke2024Epigenetic/pseudobulk_rna/OPC/age60-80/bigwigcontent_copy
Type position_score
Version 0
Summary RNA for OPC cell type for age_range age60-80
Description
Labels
  • age_range: age60-80
  • assay: 10x_Multiome
  • brain_region: hippocampus
  • cell_type: OPC
  • data_types: expression_signal
  • dataset: zemke2024Epigenetic
  • modalities: RNA
  • processing_level: RPKM_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (1)

ID Type Default annotation Description Histogram Range Summary
zemke2024Epigenetic_RNA_OPC_age60-80 float

zemke2024Epigenetic_RNA_OPC_age60-80

RPKM?
HISTOGRAM FOR zemke2024Epigenetic_RNA_OPC_age60-80 [0, 2.91e+04]
n
3,099,750,718
mean
0.947
sd
17.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3099750718 15810158
chr1 248956422 100.00% 1325830
chr2 242193529 100.00% 1398646
chr3 198295559 100.00% 1211207
chr4 190214555 100.00% 891487
chr5 181538259 100.00% 905948
chr6 170805979 100.00% 861209
chr7 159345973 100.00% 961552
chr8 145138636 100.00% 749540
chr9 138394717 100.00% 662451
chr10 133797422 100.00% 781531
chr11 135086622 100.00% 770693
chr12 133275309 100.00% 755516
chr13 114364328 100.00% 457186
chr14 107043718 100.00% 555008
chr15 101991189 100.00% 504661
chr16 90338345 100.00% 434351
chr17 83257441 100.00% 498272
chr18 80373285 100.00% 373332
chr19 58617616 100.00% 351836
chr20 64444167 100.00% 326896
chr21 46709983 100.00% 185126
chr22 50818468 100.00% 196922
chrM 16569 100.00% 332
chrX 156040895 100.00% 581709
chrY 57227415 100.00% 44787
GL000008.2 209709 614
GL000009.2 201709 754
GL000194.1 191469 966
GL000195.1 182896 1402
GL000205.2 185591 928
GL000208.1 92689 51
GL000213.1 164239 85
GL000214.1 137718 371
GL000216.2 176608 53
GL000218.1 161147 782
GL000219.1 179198 1771
GL000220.1 161802 920
GL000221.1 155397 1050
GL000224.1 179693 751
GL000225.1 211173 25
GL000226.1 15008 1
KI270302.1 2274 1
KI270303.1 1942 1
KI270304.1 2165 1
KI270305.1 1472 1
KI270310.1 1201 1
KI270311.1 12399 1
KI270312.1 998 1
KI270315.1 2276 1
KI270316.1 1444 1
KI270317.1 37690 1
KI270320.1 4416 1
KI270322.1 21476 1
KI270329.1 1040 1
KI270330.1 1652 20
KI270333.1 2699 1
KI270334.1 1368 1
KI270335.1 1048 1
KI270336.1 1026 1
KI270337.1 1121 2
KI270338.1 1428 1
KI270340.1 1428 1
KI270362.1 3530 1
KI270363.1 1803 3
KI270364.1 2855 1
KI270366.1 8320 1
KI270371.1 2805 1
KI270372.1 1650 1
KI270373.1 1451 1
KI270374.1 2656 1
KI270375.1 2378 1
KI270376.1 1136 4
KI270378.1 1048 1
KI270379.1 1045 9
KI270381.1 1930 1
KI270382.1 4215 1
KI270383.1 1750 1
KI270384.1 1658 1
KI270385.1 990 1
KI270386.1 1788 1
KI270387.1 1537 1
KI270388.1 1216 1
KI270389.1 1298 1
KI270390.1 2387 1
KI270391.1 1484 1
KI270392.1 971 1
KI270393.1 1308 1
KI270394.1 970 1
KI270395.1 1143 1
KI270396.1 1880 1
KI270411.1 2646 1
KI270412.1 1179 1
KI270414.1 2489 1
KI270417.1 2043 1
KI270418.1 2145 1
KI270419.1 1029 1
KI270420.1 2321 1
KI270422.1 1445 1
KI270423.1 981 1
KI270424.1 2140 1
KI270425.1 1884 1
KI270429.1 1361 1
KI270435.1 92983 47
KI270438.1 112505 9
KI270442.1 392061 320
KI270448.1 7992 14
KI270465.1 1774 1
KI270466.1 1233 4
KI270467.1 3920 21
KI270468.1 4055 4
KI270507.1 5353 1
KI270508.1 1951 5
KI270509.1 2318 1
KI270510.1 2415 1
KI270511.1 8127 1
KI270512.1 22689 14
KI270515.1 6361 1
KI270516.1 1300 1
KI270517.1 3253 1
KI270518.1 2186 1
KI270519.1 138126 19
KI270521.1 7642 3
KI270522.1 5674 1
KI270528.1 2983 1
KI270529.1 1899 1
KI270530.1 2168 1
KI270538.1 91309 15
KI270539.1 993 1
KI270544.1 1202 1
KI270548.1 1599 1
KI270579.1 31033 3
KI270580.1 1553 1
KI270581.1 7046 3
KI270582.1 6504 1
KI270583.1 1400 3
KI270584.1 4513 1
KI270587.1 2969 1
KI270588.1 6158 1
KI270589.1 44474 11
KI270590.1 4685 1
KI270591.1 5796 1
KI270593.1 3041 1
KI270706.1 175055 1444
KI270707.1 32032 219
KI270708.1 127682 79
KI270709.1 66860 68
KI270710.1 40176 17
KI270711.1 42210 466
KI270712.1 176043 325
KI270713.1 40745 233
KI270714.1 41717 76
KI270715.1 161471 21
KI270716.1 153799 25
KI270717.1 40062 246
KI270718.1 38054 639
KI270719.1 176845 977
KI270720.1 39050 103
KI270721.1 100316 95
KI270722.1 194050 97
KI270723.1 38115 18
KI270724.1 39555 15
KI270725.1 172810 201
KI270726.1 43739 19
KI270727.1 448248 1106
KI270728.1 1872759 835
KI270729.1 280839 120
KI270730.1 112551 3
KI270731.1 150754 66
KI270732.1 41543 62
KI270733.1 179772 845
KI270734.1 165050 370
KI270735.1 42811 25
KI270736.1 181920 12
KI270737.1 103838 50
KI270738.1 99375 98
KI270739.1 73985 15
KI270740.1 37240 13
KI270741.1 157432 483
KI270742.1 186739 1338
KI270743.1 210658 424
KI270744.1 168472 469
KI270745.1 41891 145
KI270746.1 66486 114
KI270747.1 198735 127
KI270748.1 93321 173
KI270749.1 158759 171
KI270750.1 148850 73
KI270751.1 150742 241
KI270752.1 27745 1
KI270753.1 62944 43
KI270754.1 40191 1
KI270755.1 36723 181
KI270756.1 79590 3
KI270757.1 71251 3

Segment lengths

segments min max mean median
segments 15810158 2 30162050 196.06 50
global segment-length histogram

Files

Filename Size md5
GSE278576_RNA_OPC_age60-80.bw 87.52 MB 75c0027ea226c7258f025d66b0954c25
genomic_resource.yaml 1.1 KB 1ce01006309ff7f4380775a4f646b1e0
statistics/