Resource

Id summary/zemke2024Epigenetic/pseudobulk_rna/OPC/age80-100/bigwigcontent_copy
Type position_score
Version 0
Summary RNA for OPC cell type for age_range age80-100
Description
Labels
  • age_range: age80-100
  • assay: 10x_Multiome
  • brain_region: hippocampus
  • cell_type: OPC
  • data_types: expression_signal
  • dataset: zemke2024Epigenetic
  • modalities: RNA
  • processing_level: RPKM_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (1)

ID Type Default annotation Description Histogram Range Summary
zemke2024Epigenetic_RNA_OPC_age80-100 float

zemke2024Epigenetic_RNA_OPC_age80-100

RPKM?
HISTOGRAM FOR zemke2024Epigenetic_RNA_OPC_age80-100 [0, 3.36e+04]
n
3,099,750,718
mean
0.94
sd
16

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3099750718 17078801
chr1 248956422 100.00% 1427368
chr2 242193529 100.00% 1508709
chr3 198295559 100.00% 1315186
chr4 190214555 100.00% 958051
chr5 181538259 100.00% 983344
chr6 170805979 100.00% 929132
chr7 159345973 100.00% 1030714
chr8 145138636 100.00% 813372
chr9 138394717 100.00% 721046
chr10 133797422 100.00% 834557
chr11 135086622 100.00% 841939
chr12 133275309 100.00% 816574
chr13 114364328 100.00% 493613
chr14 107043718 100.00% 592596
chr15 101991189 100.00% 538771
chr16 90338345 100.00% 470791
chr17 83257441 100.00% 530732
chr18 80373285 100.00% 404353
chr19 58617616 100.00% 369284
chr20 64444167 100.00% 357284
chr21 46709983 100.00% 203589
chr22 50818468 100.00% 213432
chrM 16569 100.00% 332
chrX 156040895 100.00% 650461
chrY 57227415 100.00% 44649
GL000008.2 209709 787
GL000009.2 201709 996
GL000194.1 191469 1110
GL000195.1 182896 1441
GL000205.2 185591 995
GL000208.1 92689 85
GL000213.1 164239 153
GL000214.1 137718 552
GL000216.2 176608 45
GL000218.1 161147 986
GL000219.1 179198 1952
GL000220.1 161802 935
GL000221.1 155397 1133
GL000224.1 179693 842
GL000225.1 211173 42
GL000226.1 15008 1
KI270302.1 2274 1
KI270303.1 1942 1
KI270304.1 2165 1
KI270305.1 1472 1
KI270310.1 1201 1
KI270311.1 12399 1
KI270312.1 998 1
KI270315.1 2276 1
KI270316.1 1444 1
KI270317.1 37690 1
KI270320.1 4416 1
KI270322.1 21476 1
KI270329.1 1040 1
KI270330.1 1652 22
KI270333.1 2699 1
KI270334.1 1368 1
KI270335.1 1048 1
KI270336.1 1026 1
KI270337.1 1121 1
KI270338.1 1428 1
KI270340.1 1428 1
KI270362.1 3530 1
KI270363.1 1803 2
KI270364.1 2855 1
KI270366.1 8320 1
KI270371.1 2805 1
KI270372.1 1650 3
KI270373.1 1451 1
KI270374.1 2656 1
KI270375.1 2378 1
KI270376.1 1136 1
KI270378.1 1048 1
KI270379.1 1045 10
KI270381.1 1930 1
KI270382.1 4215 1
KI270383.1 1750 1
KI270384.1 1658 1
KI270385.1 990 1
KI270386.1 1788 1
KI270387.1 1537 1
KI270388.1 1216 1
KI270389.1 1298 1
KI270390.1 2387 1
KI270391.1 1484 1
KI270392.1 971 1
KI270393.1 1308 1
KI270394.1 970 1
KI270395.1 1143 1
KI270396.1 1880 1
KI270411.1 2646 1
KI270412.1 1179 1
KI270414.1 2489 1
KI270417.1 2043 1
KI270418.1 2145 1
KI270419.1 1029 1
KI270420.1 2321 1
KI270422.1 1445 1
KI270423.1 981 1
KI270424.1 2140 1
KI270425.1 1884 1
KI270429.1 1361 1
KI270435.1 92983 36
KI270438.1 112505 16
KI270442.1 392061 379
KI270448.1 7992 16
KI270465.1 1774 1
KI270466.1 1233 1
KI270467.1 3920 5
KI270468.1 4055 6
KI270507.1 5353 1
KI270508.1 1951 8
KI270509.1 2318 3
KI270510.1 2415 1
KI270511.1 8127 1
KI270512.1 22689 13
KI270515.1 6361 1
KI270516.1 1300 1
KI270517.1 3253 1
KI270518.1 2186 1
KI270519.1 138126 31
KI270521.1 7642 9
KI270522.1 5674 1
KI270528.1 2983 1
KI270529.1 1899 1
KI270530.1 2168 1
KI270538.1 91309 21
KI270539.1 993 1
KI270544.1 1202 1
KI270548.1 1599 1
KI270579.1 31033 3
KI270580.1 1553 3
KI270581.1 7046 4
KI270582.1 6504 1
KI270583.1 1400 1
KI270584.1 4513 1
KI270587.1 2969 1
KI270588.1 6158 1
KI270589.1 44474 15
KI270590.1 4685 1
KI270591.1 5796 1
KI270593.1 3041 1
KI270706.1 175055 2042
KI270707.1 32032 295
KI270708.1 127682 116
KI270709.1 66860 92
KI270710.1 40176 11
KI270711.1 42210 543
KI270712.1 176043 399
KI270713.1 40745 224
KI270714.1 41717 85
KI270715.1 161471 29
KI270716.1 153799 19
KI270717.1 40062 379
KI270718.1 38054 691
KI270719.1 176845 1148
KI270720.1 39050 120
KI270721.1 100316 131
KI270722.1 194050 127
KI270723.1 38115 26
KI270724.1 39555 7
KI270725.1 172810 295
KI270726.1 43739 20
KI270727.1 448248 1382
KI270728.1 1872759 1040
KI270729.1 280839 140
KI270730.1 112551 3
KI270731.1 150754 77
KI270732.1 41543 66
KI270733.1 179772 944
KI270734.1 165050 361
KI270735.1 42811 30
KI270736.1 181920 13
KI270737.1 103838 69
KI270738.1 99375 104
KI270739.1 73985 14
KI270740.1 37240 19
KI270741.1 157432 519
KI270742.1 186739 1557
KI270743.1 210658 581
KI270744.1 168472 820
KI270745.1 41891 161
KI270746.1 66486 134
KI270747.1 198735 161
KI270748.1 93321 266
KI270749.1 158759 217
KI270750.1 148850 75
KI270751.1 150742 390
KI270752.1 27745 3
KI270753.1 62944 41
KI270754.1 40191 3
KI270755.1 36723 188
KI270756.1 79590 3
KI270757.1 71251 1

Segment lengths

segments min max mean median
segments 17078801 2 30102650 181.5 50
global segment-length histogram

Files

Filename Size md5
GSE278576_RNA_OPC_age80-100.bw 95.53 MB 57aee52d607eb4c99a3db471a05cd345
genomic_resource.yaml 1.1 KB 97a8d0417f2c002aa307b22e90b32d0b
statistics/