Resource

Id	summary/zemke2024Epigenetic/pseudobulk_rna/SUB/age40-60/bigwigcontent_copy
Type	position_score
Version	0
Summary	RNA for SUB cell type for age_range age40-60
Description
Labels	age_range: age40-60 assay: 10x_Multiome brain_region: hippocampus cell_type: SUB data_types: expression_signal dataset: zemke2024Epigenetic modalities: RNA processing_level: RPKM_normalized reference_genome: reference/Human/genome/ucsc-hg38 resolution: pseudo_bulk_cell_type sequencing_platform: Illumina species: human vendor: 10x_Genomics

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2024Epigenetic_RNA_SUB_age40-60	float	zemke2024Epigenetic_RNA_SUB_age40-60	RPKM?		[0, 5.88e+04]	n 3,099,750,718 mean 0.96 sd 25.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome	Covered positions	Covered %	Segments
all chromosomes	3099750718		19689415
chr1	248956422	100.00%	1664626
chr2	242193529	100.00%	1696464
chr3	198295559	100.00%	1424086
chr4	190214555	100.00%	1105300
chr5	181538259	100.00%	1221036
chr6	170805979	100.00%	1143129
chr7	159345973	100.00%	1169046
chr8	145138636	100.00%	945067
chr9	138394717	100.00%	878330
chr10	133797422	100.00%	901460
chr11	135086622	100.00%	917586
chr12	133275309	100.00%	959563
chr13	114364328	100.00%	583297
chr14	107043718	100.00%	630436
chr15	101991189	100.00%	632200
chr16	90338345	100.00%	583898
chr17	83257441	100.00%	639450
chr18	80373285	100.00%	451461
chr19	58617616	100.00%	457008
chr20	64444167	100.00%	390101
chr21	46709983	100.00%	216859
chr22	50818468	100.00%	260845
chrM	16569	100.00%	332
chrX	156040895	100.00%	739972
chrY	57227415	100.00%	49010
GL000008.2	209709		573
GL000009.2	201709		829
GL000194.1	191469		970
GL000195.1	182896		893
GL000205.2	185591		656
GL000208.1	92689		86
GL000213.1	164239		119
GL000214.1	137718		571
GL000216.2	176608		105
GL000218.1	161147		1091
GL000219.1	179198		2088
GL000220.1	161802		869
GL000221.1	155397		971
GL000224.1	179693		627
GL000225.1	211173		139
GL000226.1	15008		1
KI270302.1	2274		1
KI270303.1	1942		13
KI270304.1	2165		7
KI270305.1	1472		10
KI270310.1	1201		9
KI270311.1	12399		7
KI270312.1	998		1
KI270315.1	2276		9
KI270316.1	1444		1
KI270317.1	37690		1
KI270320.1	4416		9
KI270322.1	21476		13
KI270329.1	1040		1
KI270330.1	1652		15
KI270333.1	2699		1
KI270334.1	1368		1
KI270335.1	1048		1
KI270336.1	1026		1
KI270337.1	1121		3
KI270338.1	1428		1
KI270340.1	1428		1
KI270362.1	3530		3
KI270363.1	1803		1
KI270364.1	2855		1
KI270366.1	8320		1
KI270371.1	2805		1
KI270372.1	1650		1
KI270373.1	1451		3
KI270374.1	2656		1
KI270375.1	2378		3
KI270376.1	1136		1
KI270378.1	1048		1
KI270379.1	1045		3
KI270381.1	1930		1
KI270382.1	4215		3
KI270383.1	1750		1
KI270384.1	1658		1
KI270385.1	990		1
KI270386.1	1788		1
KI270387.1	1537		1
KI270388.1	1216		3
KI270389.1	1298		1
KI270390.1	2387		1
KI270391.1	1484		1
KI270392.1	971		1
KI270393.1	1308		1
KI270394.1	970		1
KI270395.1	1143		1
KI270396.1	1880		1
KI270411.1	2646		3
KI270412.1	1179		1
KI270414.1	2489		1
KI270417.1	2043		1
KI270418.1	2145		1
KI270419.1	1029		1
KI270420.1	2321		1
KI270422.1	1445		1
KI270423.1	981		1
KI270424.1	2140		1
KI270425.1	1884		1
KI270429.1	1361		1
KI270435.1	92983		44
KI270438.1	112505		15
KI270442.1	392061		379
KI270448.1	7992		14
KI270465.1	1774		1
KI270466.1	1233		1
KI270467.1	3920		7
KI270468.1	4055		6
KI270507.1	5353		1
KI270508.1	1951		1
KI270509.1	2318		3
KI270510.1	2415		1
KI270511.1	8127		1
KI270512.1	22689		18
KI270515.1	6361		1
KI270516.1	1300		1
KI270517.1	3253		1
KI270518.1	2186		1
KI270519.1	138126		49
KI270521.1	7642		3
KI270522.1	5674		1
KI270528.1	2983		1
KI270529.1	1899		1
KI270530.1	2168		1
KI270538.1	91309		20
KI270539.1	993		1
KI270544.1	1202		1
KI270548.1	1599		1
KI270579.1	31033		5
KI270580.1	1553		1
KI270581.1	7046		3
KI270582.1	6504		1
KI270583.1	1400		4
KI270584.1	4513		1
KI270587.1	2969		1
KI270588.1	6158		1
KI270589.1	44474		21
KI270590.1	4685		1
KI270591.1	5796		1
KI270593.1	3041		1
KI270706.1	175055		1784
KI270707.1	32032		272
KI270708.1	127682		106
KI270709.1	66860		66
KI270710.1	40176		13
KI270711.1	42210		459
KI270712.1	176043		1205
KI270713.1	40745		279
KI270714.1	41717		178
KI270715.1	161471		87
KI270716.1	153799		82
KI270717.1	40062		310
KI270718.1	38054		683
KI270719.1	176845		1090
KI270720.1	39050		134
KI270721.1	100316		166
KI270722.1	194050		131
KI270723.1	38115		31
KI270724.1	39555		28
KI270725.1	172810		279
KI270726.1	43739		18
KI270727.1	448248		1351
KI270728.1	1872759		1458
KI270729.1	280839		149
KI270730.1	112551		3
KI270731.1	150754		349
KI270732.1	41543		58
KI270733.1	179772		889
KI270734.1	165050		525
KI270735.1	42811		53
KI270736.1	181920		16
KI270737.1	103838		48
KI270738.1	99375		115
KI270739.1	73985		18
KI270740.1	37240		1
KI270741.1	157432		508
KI270742.1	186739		1363
KI270743.1	210658		500
KI270744.1	168472		702
KI270745.1	41891		236
KI270746.1	66486		136
KI270747.1	198735		155
KI270748.1	93321		366
KI270749.1	158759		248
KI270750.1	148850		156
KI270751.1	150742		380
KI270752.1	27745		3
KI270753.1	62944		89
KI270754.1	40191		35
KI270755.1	36723		162
KI270756.1	79590		1
KI270757.1	71251		15

Segment lengths

	segments	min	max	mean	median
segments	19689415	2	30093700	157.43	50

Files

Filename	Size	md5
GSE278576_RNA_SUB_age40-60.bw	112.85 MB	c3bc3b95a854d140bd1f67f4829a5604
genomic_resource.yaml	1.1 KB	04f89ebf080ce94b1ae9bf1f3a096e8e
statistics/