Resource

Id	summary/zemke2024Epigenetic/pseudobulk_rna/SUB/all/bigwigcontent_copy
Type	position_score
Version	0
Summary	RNA for SUB cell type for age_range all
Description
Labels	age_range: all assay: 10x_Multiome brain_region: hippocampus cell_type: SUB data_types: expression_signal dataset: zemke2024Epigenetic modalities: RNA processing_level: RPKM_normalized reference_genome: reference/Human/genome/ucsc-hg38 resolution: pseudo_bulk_cell_type sequencing_platform: Illumina species: human vendor: 10x_Genomics

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2024Epigenetic_RNA_SUB_all	float	zemke2024Epigenetic_RNA_SUB_all	RPKM?		[0, 5.49e+04]	n 3,099,750,718 mean 0.946 sd 24.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome	Covered positions	Covered %	Segments
all chromosomes	3099750718		35870650
chr1	248956422	100.00%	2925799
chr2	242193529	100.00%	3051602
chr3	198295559	100.00%	2540932
chr4	190214555	100.00%	2117005
chr5	181538259	100.00%	2247765
chr6	170805979	100.00%	2090036
chr7	159345973	100.00%	2044247
chr8	145138636	100.00%	1720671
chr9	138394717	100.00%	1592853
chr10	133797422	100.00%	1629264
chr11	135086622	100.00%	1693565
chr12	133275309	100.00%	1724767
chr13	114364328	100.00%	1089536
chr14	107043718	100.00%	1156492
chr15	101991189	100.00%	1130585
chr16	90338345	100.00%	1026116
chr17	83257441	100.00%	1096442
chr18	80373285	100.00%	868970
chr19	58617616	100.00%	788986
chr20	64444167	100.00%	729032
chr21	46709983	100.00%	417924
chr22	50818468	100.00%	470035
chrM	16569	100.00%	332
chrX	156040895	100.00%	1542840
chrY	57227415	100.00%	107375
GL000008.2	209709		1674
GL000009.2	201709		1847
GL000194.1	191469		1813
GL000195.1	182896		1642
GL000205.2	185591		1732
GL000208.1	92689		293
GL000213.1	164239		453
GL000214.1	137718		1425
GL000216.2	176608		573
GL000218.1	161147		1669
GL000219.1	179198		3100
GL000220.1	161802		1523
GL000221.1	155397		1609
GL000224.1	179693		1746
GL000225.1	211173		876
GL000226.1	15008		1
KI270302.1	2274		5
KI270303.1	1942		28
KI270304.1	2165		22
KI270305.1	1472		10
KI270310.1	1201		22
KI270311.1	12399		28
KI270312.1	998		5
KI270315.1	2276		27
KI270316.1	1444		5
KI270317.1	37690		9
KI270320.1	4416		30
KI270322.1	21476		35
KI270329.1	1040		1
KI270330.1	1652		33
KI270333.1	2699		7
KI270334.1	1368		1
KI270335.1	1048		1
KI270336.1	1026		3
KI270337.1	1121		6
KI270338.1	1428		1
KI270340.1	1428		3
KI270362.1	3530		3
KI270363.1	1803		14
KI270364.1	2855		3
KI270366.1	8320		3
KI270371.1	2805		1
KI270372.1	1650		3
KI270373.1	1451		6
KI270374.1	2656		3
KI270375.1	2378		3
KI270376.1	1136		5
KI270378.1	1048		1
KI270379.1	1045		10
KI270381.1	1930		1
KI270382.1	4215		10
KI270383.1	1750		1
KI270384.1	1658		1
KI270385.1	990		1
KI270386.1	1788		1
KI270387.1	1537		1
KI270388.1	1216		5
KI270389.1	1298		1
KI270390.1	2387		1
KI270391.1	1484		1
KI270392.1	971		5
KI270393.1	1308		3
KI270394.1	970		1
KI270395.1	1143		1
KI270396.1	1880		3
KI270411.1	2646		3
KI270412.1	1179		1
KI270414.1	2489		1
KI270417.1	2043		2
KI270418.1	2145		1
KI270419.1	1029		1
KI270420.1	2321		1
KI270422.1	1445		1
KI270423.1	981		1
KI270424.1	2140		1
KI270425.1	1884		1
KI270429.1	1361		1
KI270435.1	92983		174
KI270438.1	112505		111
KI270442.1	392061		1147
KI270448.1	7992		46
KI270465.1	1774		1
KI270466.1	1233		22
KI270467.1	3920		55
KI270468.1	4055		22
KI270507.1	5353		1
KI270508.1	1951		19
KI270509.1	2318		7
KI270510.1	2415		1
KI270511.1	8127		1
KI270512.1	22689		63
KI270515.1	6361		3
KI270516.1	1300		1
KI270517.1	3253		1
KI270518.1	2186		1
KI270519.1	138126		174
KI270521.1	7642		26
KI270522.1	5674		5
KI270528.1	2983		1
KI270529.1	1899		1
KI270530.1	2168		1
KI270538.1	91309		67
KI270539.1	993		3
KI270544.1	1202		3
KI270548.1	1599		3
KI270579.1	31033		24
KI270580.1	1553		3
KI270581.1	7046		15
KI270582.1	6504		5
KI270583.1	1400		9
KI270584.1	4513		3
KI270587.1	2969		1
KI270588.1	6158		1
KI270589.1	44474		32
KI270590.1	4685		1
KI270591.1	5796		1
KI270593.1	3041		3
KI270706.1	175055		3148
KI270707.1	32032		556
KI270708.1	127682		417
KI270709.1	66860		216
KI270710.1	40176		62
KI270711.1	42210		715
KI270712.1	176043		2391
KI270713.1	40745		514
KI270714.1	41717		378
KI270715.1	161471		531
KI270716.1	153799		491
KI270717.1	40062		555
KI270718.1	38054		742
KI270719.1	176845		1774
KI270720.1	39050		328
KI270721.1	100316		660
KI270722.1	194050		519
KI270723.1	38115		158
KI270724.1	39555		136
KI270725.1	172810		824
KI270726.1	43739		61
KI270727.1	448248		3530
KI270728.1	1872759		5726
KI270729.1	280839		620
KI270730.1	112551		30
KI270731.1	150754		882
KI270732.1	41543		183
KI270733.1	179772		1704
KI270734.1	165050		1355
KI270735.1	42811		158
KI270736.1	181920		179
KI270737.1	103838		235
KI270738.1	99375		342
KI270739.1	73985		79
KI270740.1	37240		86
KI270741.1	157432		1341
KI270742.1	186739		2171
KI270743.1	210658		1414
KI270744.1	168472		1954
KI270745.1	41891		574
KI270746.1	66486		419
KI270747.1	198735		520
KI270748.1	93321		810
KI270749.1	158759		766
KI270750.1	148850		600
KI270751.1	150742		1129
KI270752.1	27745		10
KI270753.1	62944		412
KI270754.1	40191		89
KI270755.1	36723		471
KI270756.1	79590		24
KI270757.1	71251		67

Segment lengths

	segments	min	max	mean	median
segments	35870650	1	30007350	86.41	50

Files

Filename	Size	md5
GSE278576_RNA_SUB.bw	218.34 MB	4b5585e8abab9c054c29eccf16526510
genomic_resource.yaml	1.07 KB	6612b5ade53a7da16190ab6dec3265e1
statistics/