Resource
| Id | summary/zemke2024Epigenetic/pseudobulk_rna/VIP/age80-100/bigwig |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | RNA for VIP cell type for age_range age80-100 |
| Description | |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| zemke2024Epigenetic_RNA_VIP_age80-100 | float |
zemke2024Epigenetic_RNA_VIP_age80-100 |
RPKM?
|
 |
[0, 4.11e+04] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 3099750718 | 17563343 | |
| chr1 | 248956422 | 100.00% | 1481608 |
| chr2 | 242193529 | 100.00% | 1499295 |
| chr3 | 198295559 | 100.00% | 1351112 |
| chr4 | 190214555 | 100.00% | 1004436 |
| chr5 | 181538259 | 100.00% | 1055120 |
| chr6 | 170805979 | 100.00% | 1007335 |
| chr7 | 159345973 | 100.00% | 1065628 |
| chr8 | 145138636 | 100.00% | 815798 |
| chr9 | 138394717 | 100.00% | 765032 |
| chr10 | 133797422 | 100.00% | 784993 |
| chr11 | 135086622 | 100.00% | 796219 |
| chr12 | 133275309 | 100.00% | 853862 |
| chr13 | 114364328 | 100.00% | 479667 |
| chr14 | 107043718 | 100.00% | 575968 |
| chr15 | 101991189 | 100.00% | 595748 |
| chr16 | 90338345 | 100.00% | 506002 |
| chr17 | 83257441 | 100.00% | 570432 |
| chr18 | 80373285 | 100.00% | 407069 |
| chr19 | 58617616 | 100.00% | 396316 |
| chr20 | 64444167 | 100.00% | 354831 |
| chr21 | 46709983 | 100.00% | 205957 |
| chr22 | 50818468 | 100.00% | 236982 |
| chrM | 16569 | 100.00% | 331 |
| chrX | 156040895 | 100.00% | 676978 |
| chrY | 57227415 | 100.00% | 49483 |
| GL000008.2 | 209709 | 618 | |
| GL000009.2 | 201709 | 856 | |
| GL000194.1 | 191469 | 1117 | |
| GL000195.1 | 182896 | 900 | |
| GL000205.2 | 185591 | 424 | |
| GL000208.1 | 92689 | 87 | |
| GL000213.1 | 164239 | 110 | |
| GL000214.1 | 137718 | 397 | |
| GL000216.2 | 176608 | 71 | |
| GL000218.1 | 161147 | 897 | |
| GL000219.1 | 179198 | 1703 | |
| GL000220.1 | 161802 | 665 | |
| GL000221.1 | 155397 | 999 | |
| GL000224.1 | 179693 | 744 | |
| GL000225.1 | 211173 | 71 | |
| GL000226.1 | 15008 | 1 | |
| KI270302.1 | 2274 | 3 | |
| KI270303.1 | 1942 | 8 | |
| KI270304.1 | 2165 | 9 | |
| KI270305.1 | 1472 | 1 | |
| KI270310.1 | 1201 | 9 | |
| KI270311.1 | 12399 | 3 | |
| KI270312.1 | 998 | 1 | |
| KI270315.1 | 2276 | 7 | |
| KI270316.1 | 1444 | 1 | |
| KI270317.1 | 37690 | 3 | |
| KI270320.1 | 4416 | 3 | |
| KI270322.1 | 21476 | 1 | |
| KI270329.1 | 1040 | 1 | |
| KI270330.1 | 1652 | 24 | |
| KI270333.1 | 2699 | 4 | |
| KI270334.1 | 1368 | 1 | |
| KI270335.1 | 1048 | 1 | |
| KI270336.1 | 1026 | 1 | |
| KI270337.1 | 1121 | 3 | |
| KI270338.1 | 1428 | 1 | |
| KI270340.1 | 1428 | 1 | |
| KI270362.1 | 3530 | 1 | |
| KI270363.1 | 1803 | 7 | |
| KI270364.1 | 2855 | 1 | |
| KI270366.1 | 8320 | 5 | |
| KI270371.1 | 2805 | 1 | |
| KI270372.1 | 1650 | 1 | |
| KI270373.1 | 1451 | 3 | |
| KI270374.1 | 2656 | 1 | |
| KI270375.1 | 2378 | 1 | |
| KI270376.1 | 1136 | 1 | |
| KI270378.1 | 1048 | 1 | |
| KI270379.1 | 1045 | 3 | |
| KI270381.1 | 1930 | 1 | |
| KI270382.1 | 4215 | 1 | |
| KI270383.1 | 1750 | 1 | |
| KI270384.1 | 1658 | 1 | |
| KI270385.1 | 990 | 1 | |
| KI270386.1 | 1788 | 1 | |
| KI270387.1 | 1537 | 1 | |
| KI270388.1 | 1216 | 1 | |
| KI270389.1 | 1298 | 1 | |
| KI270390.1 | 2387 | 1 | |
| KI270391.1 | 1484 | 1 | |
| KI270392.1 | 971 | 1 | |
| KI270393.1 | 1308 | 3 | |
| KI270394.1 | 970 | 1 | |
| KI270395.1 | 1143 | 1 | |
| KI270396.1 | 1880 | 1 | |
| KI270411.1 | 2646 | 5 | |
| KI270412.1 | 1179 | 1 | |
| KI270414.1 | 2489 | 3 | |
| KI270417.1 | 2043 | 1 | |
| KI270418.1 | 2145 | 1 | |
| KI270419.1 | 1029 | 1 | |
| KI270420.1 | 2321 | 1 | |
| KI270422.1 | 1445 | 1 | |
| KI270423.1 | 981 | 1 | |
| KI270424.1 | 2140 | 1 | |
| KI270425.1 | 1884 | 1 | |
| KI270429.1 | 1361 | 1 | |
| KI270435.1 | 92983 | 27 | |
| KI270438.1 | 112505 | 21 | |
| KI270442.1 | 392061 | 292 | |
| KI270448.1 | 7992 | 16 | |
| KI270465.1 | 1774 | 1 | |
| KI270466.1 | 1233 | 1 | |
| KI270467.1 | 3920 | 22 | |
| KI270468.1 | 4055 | 9 | |
| KI270507.1 | 5353 | 1 | |
| KI270508.1 | 1951 | 9 | |
| KI270509.1 | 2318 | 1 | |
| KI270510.1 | 2415 | 1 | |
| KI270511.1 | 8127 | 1 | |
| KI270512.1 | 22689 | 19 | |
| KI270515.1 | 6361 | 3 | |
| KI270516.1 | 1300 | 1 | |
| KI270517.1 | 3253 | 1 | |
| KI270518.1 | 2186 | 1 | |
| KI270519.1 | 138126 | 29 | |
| KI270521.1 | 7642 | 8 | |
| KI270522.1 | 5674 | 1 | |
| KI270528.1 | 2983 | 1 | |
| KI270529.1 | 1899 | 1 | |
| KI270530.1 | 2168 | 1 | |
| KI270538.1 | 91309 | 12 | |
| KI270539.1 | 993 | 1 | |
| KI270544.1 | 1202 | 1 | |
| KI270548.1 | 1599 | 1 | |
| KI270579.1 | 31033 | 1 | |
| KI270580.1 | 1553 | 1 | |
| KI270581.1 | 7046 | 3 | |
| KI270582.1 | 6504 | 1 | |
| KI270583.1 | 1400 | 1 | |
| KI270584.1 | 4513 | 1 | |
| KI270587.1 | 2969 | 1 | |
| KI270588.1 | 6158 | 1 | |
| KI270589.1 | 44474 | 17 | |
| KI270590.1 | 4685 | 1 | |
| KI270591.1 | 5796 | 1 | |
| KI270593.1 | 3041 | 1 | |
| KI270706.1 | 175055 | 1491 | |
| KI270707.1 | 32032 | 240 | |
| KI270708.1 | 127682 | 89 | |
| KI270709.1 | 66860 | 75 | |
| KI270710.1 | 40176 | 7 | |
| KI270711.1 | 42210 | 479 | |
| KI270712.1 | 176043 | 763 | |
| KI270713.1 | 40745 | 176 | |
| KI270714.1 | 41717 | 151 | |
| KI270715.1 | 161471 | 96 | |
| KI270716.1 | 153799 | 102 | |
| KI270717.1 | 40062 | 261 | |
| KI270718.1 | 38054 | 665 | |
| KI270719.1 | 176845 | 1306 | |
| KI270720.1 | 39050 | 95 | |
| KI270721.1 | 100316 | 100 | |
| KI270722.1 | 194050 | 110 | |
| KI270723.1 | 38115 | 25 | |
| KI270724.1 | 39555 | 13 | |
| KI270725.1 | 172810 | 253 | |
| KI270726.1 | 43739 | 15 | |
| KI270727.1 | 448248 | 2851 | |
| KI270728.1 | 1872759 | 1054 | |
| KI270729.1 | 280839 | 160 | |
| KI270730.1 | 112551 | 3 | |
| KI270731.1 | 150754 | 177 | |
| KI270732.1 | 41543 | 54 | |
| KI270733.1 | 179772 | 630 | |
| KI270734.1 | 165050 | 423 | |
| KI270735.1 | 42811 | 46 | |
| KI270736.1 | 181920 | 5 | |
| KI270737.1 | 103838 | 73 | |
| KI270738.1 | 99375 | 122 | |
| KI270739.1 | 73985 | 14 | |
| KI270740.1 | 37240 | 19 | |
| KI270741.1 | 157432 | 451 | |
| KI270742.1 | 186739 | 1521 | |
| KI270743.1 | 210658 | 416 | |
| KI270744.1 | 168472 | 574 | |
| KI270745.1 | 41891 | 196 | |
| KI270746.1 | 66486 | 223 | |
| KI270747.1 | 198735 | 132 | |
| KI270748.1 | 93321 | 154 | |
| KI270749.1 | 158759 | 184 | |
| KI270750.1 | 148850 | 97 | |
| KI270751.1 | 150742 | 285 | |
| KI270752.1 | 27745 | 5 | |
| KI270753.1 | 62944 | 271 | |
| KI270754.1 | 40191 | 17 | |
| KI270755.1 | 36723 | 143 | |
| KI270756.1 | 79590 | 7 | |
| KI270757.1 | 71251 | 1 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 17563343 | 1 | 30034950 | 176.49 | 50 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| GSE278576_RNA_VIP_age80-100.bw | 96.22 MB | 3d45e07299d771db409071c6ae741c7c |
| genomic_resource.yaml | 1.1 KB | 7f4e2ff7c8e2b0ff7a4f816219bc6231 |
| statistics/ |